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[Condor-users] Re: Questions regarding BLAST application...
- Date: Wed, 13 Oct 2004 10:32:15 -0500
- From: Zachary Miller <zmiller@xxxxxxxxxxx>
- Subject: [Condor-users] Re: Questions regarding BLAST application...
On Tue, Oct 12, 2004 at 06:51:09PM -0700, bruce wrote:
> scott/zach.. (and any others!!)
>
> i'm looking at the blast app from the condor/tools site.
i apologze for its very-beta state. soon i will release it publicly and
will work on actively improving it. if you have specific questions in the
meantime feel free to direct them to me.
> has anybody managed to get this app up/running on a linux box? did you have
> a file called setup_condor_web_portal in your tar file. the setup steps
> reference this file, but it's not included. my gut tells me that this file
> would setup some files and resolve some of the issues i'm seeing.
yeah, it sets up a few things and some permissions. here's the script:
##### START OF SCRIPT
#!/usr/bin/perl
`ls condor_web_portal-V0.01 >&/dev/null`;
if ( ! $? ) {
print "updating file permissions...\n";
system("chmod -R o+rX condor_web_portal-V0.01");
system("chmod 777 condor_web_portal-V0.01/txtdbapi/db/cblastdb condor_web_portal-V0.01/apps");
system("chmod 666 condor_web_portal-V0.01/txtdbapi/db/cblastdb/*.txt");
} else {
die "didn't find the condor_web_portal-V0.01 directory, aborting!\n";
}
print "please edit condor_web_portal-V0.01/constants.php\n";
print "also, please read the LICENSE file!\n";
exit 0;
##### END OF SCRIPT
cheers,
-zach