Re: [Condor-users] permission denied in file pseudo_ops.C ?

[Nicolas GUIOT <nicolas.guiot@xxxxxxx>]

Does anyone have a clue ?

Help would be greatly appreciated...

To complete : I ran it again; and again, it first didn't start, but then ran.

Then I dismantled it on several jobs : now none of the small jobs can run, and I still have in ShadowLog these errors (Failed to execute '/ibpc/europa2/guiot/sacquin/BDflex/runcontrol/longzach.sh condor_exec.exe': Exec format error" at line 597 in file pseudo_ops.C)

Thanks in advance

Nicolas

----------------
On Tue, 13 Dec 2005 12:10:28 +0100
Nicolas GUIOT <nicolas.guiot@xxxxxxx> wrote:

> Hi
> 
> trying to submit a job, I have strange problems....
> 
> First, I could run this job without any problem. Then I submitted it again, and it couldn't run, the only errors I found were in ShadowLog : " Permission denied" at line 597 in file pseudo_ops.C".
> I let the queue for the night, and when I came back on the day after, the job had ran !!?!? WTF ??
> Can someone give me an explanation ?
> 
> Here is an exemple of the ShadowLog : 
> 
> 12/12 18:10:10 ******************************************************
> 12/12 18:10:10 ** condor_shadow (CONDOR_SHADOW) STARTING UP
> 12/12 18:10:10 ** /ibpc/io/condor/sbin/condor_shadow
> 12/12 18:10:10 ** $CondorVersion: 6.7.10 Aug  3 2005 $
> 12/12 18:10:10 ** $CondorPlatform: I386-LINUX_RH9 $
> 12/12 18:10:10 ** PID = 316
> 12/12 18:10:10 ******************************************************
> 12/12 18:10:10 Using config file: /ibpc/io/condor/etc/condor_config
> 12/12 18:10:10 Using local config files: /scratch/condor/condor_config.local
> 12/12 18:10:10 DaemonCore: Command Socket at <193.49.27.24:52567>
> 12/12 18:10:10 Initializing a VANILLA shadow for job 43.0
> 12/12 18:10:10 (43.0) (316): Request to run on <193.49.27.11:32772> was ACCEPTED
> 12/12 18:10:10 (43.0) (316): ERROR "Error from starter on vrubel.galaxy.ibpc.fr: Failed to execute '/ibpc/europa2/guiot/sacquin/BDflex/runcontrol/longzach.sh condor_exec.exe': Exec format error" at line 597 in file pseudo_ops.C
> 12/12 18:10:12 ******************************************************
> 12/12 18:10:12 ** condor_shadow (CONDOR_SHADOW) STARTING UP
> 12/12 18:10:12 ** /ibpc/io/condor/sbin/condor_shadow
> 12/12 18:10:12 ** $CondorVersion: 6.7.10 Aug  3 2005 $
> 12/12 18:10:12 ** $CondorPlatform: I386-LINUX_RH9 $
> 12/12 18:10:12 ** PID = 319
> 12/12 18:10:12 ******************************************************
> 12/12 18:10:12 Using config file: /ibpc/io/condor/etc/condor_config
> 12/12 18:10:12 Using local config files: /scratch/condor/condor_config.local
> 12/12 18:10:12 DaemonCore: Command Socket at <193.49.27.24:52569>
> 12/12 18:10:12 Initializing a VANILLA shadow for job 43.0
> 12/12 18:10:12 (43.0) (319): Request to run on <193.49.27.11:32772> was ACCEPTED
> 12/12 18:10:12 (43.0) (319): ERROR "Error from starter on vrubel.galaxy.ibpc.fr: Failed to execute '/ibpc/europa2/guiot/sacquin/BDflex/runcontrol/longzach.sh condor_exec.exe': Exec format error" at line 597 in file pseudo_ops.C
> 12/12 18:10:15 ******************************************************
> 12/12 18:10:15 ** condor_shadow (CONDOR_SHADOW) STARTING UP
> 12/12 18:10:15 ** /ibpc/io/condor/sbin/condor_shadow
> 12/12 18:10:15 ** $CondorVersion: 6.7.10 Aug  3 2005 $
> 12/12 18:10:15 ** $CondorPlatform: I386-LINUX_RH9 $
> 12/12 18:10:15 ** PID = 322
> 12/12 18:10:15 ******************************************************
> 12/12 18:10:15 Using config file: /ibpc/io/condor/etc/condor_config
> 12/12 18:10:15 Using local config files: /scratch/condor/condor_config.local
> 12/12 18:10:15 DaemonCore: Command Socket at <193.49.27.24:52571>
> 12/12 18:10:15 Initializing a VANILLA shadow for job 43.0
> 12/12 18:10:15 (43.0) (322): Request to run on <193.49.27.11:32772> was ACCEPTED
> 12/12 18:10:15 (43.0) (322): ERROR "Error from starter on vrubel.galaxy.ibpc.fr: Failed to execute '/ibpc/europa2/guiot/sacquin/BDflex/runcontrol/longzach.sh condor_exec.exe': Exec format error" at line 597 in file pseudo_ops.C
> 12/12 18:11:13 ******************************************************
> 12/12 18:11:13 ** condor_shadow (CONDOR_SHADOW) STARTING UP
> 12/12 18:11:13 ** /ibpc/io/condor/sbin/condor_shadow
> 12/12 18:11:13 ** $CondorVersion: 6.7.10 Aug  3 2005 $
> 12/12 18:11:13 ** $CondorPlatform: I386-LINUX_RH9 $
> 12/12 18:11:13 ** PID = 348
> 12/12 18:11:13 ******************************************************
> 12/12 18:11:13 Using config file: /ibpc/io/condor/etc/condor_config
> 12/12 18:11:13 Using local config files: /scratch/condor/condor_config.local
> 12/12 18:11:13 DaemonCore: Command Socket at <193.49.27.24:52578>
> 12/12 18:11:13 Initializing a VANILLA shadow for job 43.0
> 12/12 18:11:13 (43.0) (348): Request to run on <193.49.27.11:32772> was ACCEPTED
> 12/12 18:11:15 ******************************************************
> 12/12 18:11:15 ** condor_shadow (CONDOR_SHADOW) STARTING UP
> 12/12 18:11:15 ** /ibpc/io/condor/sbin/condor_shadow
> 12/12 18:11:15 ** $CondorVersion: 6.7.10 Aug  3 2005 $
> 12/12 18:11:15 ** $CondorPlatform: I386-LINUX_RH9 $
> 12/12 18:11:15 ** PID = 355
> 12/12 18:11:15 ******************************************************
> 12/12 18:11:15 Using config file: /ibpc/io/condor/etc/condor_config
> 12/12 18:11:15 Using local config files: /scratch/condor/condor_config.local
> 12/12 18:11:15 DaemonCore: Command Socket at <193.49.27.24:52582>
> 12/12 18:11:15 Initializing a VANILLA shadow for job 44.0
> 12/12 18:11:16 (44.0) (355): Request to run on <193.49.27.81:32815> was ACCEPTED
> 12/12 18:11:19 (43.0) (348): Job 43.0 is being evicted
> 12/12 18:11:19 (43.0) (348): **** condor_shadow (condor_SHADOW) EXITING WITH STATUS 102
> 12/12 18:15:41 (44.0) (355): Job 44.0 terminated: exited with status 0
> 12/12 18:15:41 (44.0) (355): **** condor_shadow (condor_SHADOW) EXITING WITH STATUS 100
> 
> If you need extra-files, just ask...
> -----------------------------------------------
> CNRS - UPR 9080 : Laboratoire de Biochimie Theorique
> Institut de Biologie Physico-Chimique
> 13 rue Pierre et Marie Curie
> 75005 PARIS - FRANCE
> 
> Tel : +33 158 41 51 70
> Fax : +33 158 41 50 26
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----------

-----------------------------------------------
CNRS - UPR 9080 : Laboratoire de Biochimie Theorique
Institut de Biologie Physico-Chimique
13 rue Pierre et Marie Curie
75005 PARIS - FRANCE

Tel : +33 158 41 51 70
Fax : +33 158 41 50 26
------------------------------------------------