Re: [HTCondor-users] submitted jobs are not running

[Bob Ball <ball@xxxxxxxxx>]

No condor_q output was included.

Make sure that both slice_0007.sh and bedpostx_single_slice.sh have 
their execute bit set for your id.  If this is the case then do 
"condor_q -analyze" on the stuck job.

bob

On 3/10/2016 1:45 PM, Labounek René wrote:
> Dear condor users,
> I have submitted jobs but they are still held and not running. 
> Condor_status looks ok:
>
>
>
> labounek@emperor:~$ condor_status
> Name               OpSys      Arch   State     Activity LoadAv Mem   
> ActvtyTime
>
> slot10@xxxxxxxxxxx LINUX      X86_64 Unclaimed Idle      1.000 2682  
> 0+00:00:23
> slot11@xxxxxxxxxxx LINUX      X86_64 Unclaimed Idle      1.000 2682  
> 0+00:00:24
> slot12@xxxxxxxxxxx LINUX      X86_64 Unclaimed Idle      6.320 2682  
> 0+00:00:25
> slot1@xxxxxxxxxxxx LINUX      X86_64 Unclaimed Idle      1.000 2682  
> 0+00:00:04
> slot2@xxxxxxxxxxxx LINUX      X86_64 Unclaimed Idle      1.000 2682  
> 0+00:00:23
> slot3@xxxxxxxxxxxx LINUX      X86_64 Unclaimed Idle      1.000 2682  
> 0+00:00:24
> slot4@xxxxxxxxxxxx LINUX      X86_64 Unclaimed Idle      1.000 2682  
> 0+00:00:25
> slot5@xxxxxxxxxxxx LINUX      X86_64 Unclaimed Idle      1.000 2682  
> 0+00:00:26
> slot6@xxxxxxxxxxxx LINUX      X86_64 Unclaimed Idle      1.000 2682  
> 0+00:00:27
> slot7@xxxxxxxxxxxx LINUX      X86_64 Unclaimed Idle      1.000 2682  
> 0+00:00:28
> slot8@xxxxxxxxxxxx LINUX      X86_64 Unclaimed Idle      1.000 2682  
> 0+00:00:21
> slot9@xxxxxxxxxxxx LINUX      X86_64 Unclaimed Idle      1.000 2682  
> 0+00:00:22
>                      Total Owner Claimed Unclaimed Matched Preempting 
> Backfill
>
>         X86_64/LINUX    12     0       0        12 0          0        0
>
>                Total    12     0       0        12 0          0        0
> labounek@emperor:~$
>
>
>
> Condor_submit comand looked like this:
>
> condor_submit slice_0007.condor
>
> The file contains this text:
>
> Executable = /home/labounek/test/dti.bedpostX/condor_logs/slice_0007.sh
> Universe = vanilla
> output = /home/labounek/test/dti.bedpostX/condor_logs/slice_0007.out
> error = /home/labounek/test/dti.bedpostX/condor_logs/slice_0007.error
> Log   = /home/labounek/test/dti.bedpostX/condor_logs/slice_0007.log
> Queue
>
> The file slice_0007.sh contains one comand:
>
> /usr/share/fsl/5.0/bin/bedpostx_single_slice.sh 
> /home/labounek/test/dti 7 --nf=3 --fudge=1 --bi=1000 --nj=1250 --se=25 
> --model=2 --cnonlinear
>
> I think everything should be ok, but it is stucked. Here is the 
> condor_q output:
>
>
>
>
>
>
>
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