Re: [Condor-users] R script with condor

["Empain Alain" <Alain.Empain@xxxxxxxxx>]

Bonjour Alexandre,

it is a PATH problem.

You can easily cope with this problem if you write a small wrapper
extending the PATH to include /opt1/R-2.1.1/lib/R/bin, and starting the
actual executable.

Bonne journée,

Alain



> Hello condor users,
>
> does anybody already succeed to run Rscript with condor on
> UNID and/or Windows?
>
> When I tried I have and error saying:
> /opt1/R-2.1.1/lib/R/bin/Rcmd: /opt1/R-2.1.1/lib/R/bin/Rcmd:
> cannot open
>
> My submit file is the following:
> Universe = Vanilla
> Executable = /opt1/R-2.1.1/bin/R
> Log = condor_log
> Output = condor_output
> Error = condor_error
> TRANSFER_FILES = ALWAYS
> transfer_input_files = script.R, /opt1/R-2.1.1/bin/R,
> /opt1/R-2.1.1/lib/R/bin/Rcmd
> getenv = true
> Arguments = CMD BATCH script.R
> Queue
>
> regards,
> alexandre
>
> Cet été, pensez aux cartes postales de laposte.net !
>
>
>
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