[Condor-users] LAPACK and condor_compile errors

["Jerod J. Sikorskyj" <jjs@xxxxxxxxxxx>]

Title: LAPACK and condor_compile errors

Dear Condor Users:

I am trying to compile lapack-3.1.1 with condor_compile (fully installed).  I keep getting a stream of errors (reproduced below this note).  The command I am running is "condor_compile make".  Has anyone successfully used condor_compile with lapack? 

I'm actually trying to condor_compile a program called Macaulay 2, which also builds lapack as part of its compilation.  http://www.math.uiuc.edu/Macaulay2/  Whether I am using condor_compile with Macaulay2's make or just with lapack, I get the same errors listed below, failing on lapack. 

I'd be much obliged for any suggestions/help anyone can give.  Thanks in advance.

Jerod

P.S.  Using RHEL4, x86_64

_________________
FULL ERROR OUTPUT
_______________________
[jjs@wildman lapack-3.1.1]$ condor_compile make
( cd INSTALL; make; ./testlsame; ./testslamch; \
  ./testdlamch; ./testsecond; ./testdsecnd; ./testversion )
make[1]: Entering directory `/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL'
g77  -o testlsame lsame.o lsametst.o
LINKING FOR CONDOR : /usr/bin/ld.real -L/usr/bin/Condor_alone/lib -Bstatic --eh-frame-hdr -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o testlsame /usr/bin/Condor_alone/lib/condor_rt0.o /usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/3.4.6/crtbeginT.o -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../../../lib64 -L/usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../.. -L/lib/../lib64 -L/usr/lib/../lib64 lsame.o lsametst.o /usr/bin/Condor_alone/lib/libcondorsyscall.a /usr/bin/Condor_alone/lib/libcondor_z.a /usr/bin/Condor_alone/lib/libcomp_libstdc++.a -lfrtbegin -lg2c -lm /usr/bin/Condor_alone/lib/libcomp_libgcc.a /usr/bin/Condor_alone/lib/libcomp_libgcc_eh.a -lcondor_c -lcondor_nss_files -lcondor_nss_dns -lcondor_resolv -lcondor_c -lcondor_nss_files -lcondor_nss_dns -lcondor_resolv -lcondor_c /usr/bin/Condor_alone/lib/libcomp_libgcc.a /usr/bin/Condor_alone/lib/libcomp_libgcc_eh.a /usr/lib/gcc/x86_64-redhat-linux/3.4.6/crtend.o /usr/lib/gcc/x86_64-redhat-linux/3.4.6/../../../../lib64/crtn.o
/usr/bin/Condor_alone/lib/libcondorsyscall.a(condor_file_agent.o)(.text+0x382): In function `CondorFileAgent::open(char const*, int, int)':
/home/condor/execute/dir_27179/userdir/src/condor_ckpt/condor_file_agent.C:106: warning: the use of `tmpnam' is dangerous, better use `mkstemp'
/usr/bin/Condor_alone/lib/libcondorsyscall.a(switches.o)(.text+0xa659): In function `__gets_chk':
/home/condor/execute/dir_27179/userdir/src/condor_syscall_lib/switches.remap-LINUX.h:460: warning: the `gets' function is dangerous and should not be used.
lsametst.o(.text+0x15): In function `MAIN__':
/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:1: undefined reference to `_gfortran_set_std'
lsametst.o(.text+0x3d):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:25: undefined reference to `_gfortran_st_write'
lsametst.o(.text+0x4f):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:25: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x57):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:25: undefined reference to `_gfortran_st_write_done'
lsametst.o(.text+0x214):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:55: undefined reference to `_gfortran_st_write'
lsametst.o(.text+0x226):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:55: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x238):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:55: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x240):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:55: undefined reference to `_gfortran_st_write_done'
lsametst.o(.text+0x268):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:56: undefined reference to `_gfortran_st_write'
lsametst.o(.text+0x27a):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:56: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x282):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:56: undefined reference to `_gfortran_st_write_done'
lsametst.o(.text+0x2c5):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:53: undefined reference to `_gfortran_st_write'
lsametst.o(.text+0x2d7):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:53: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x2e9):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:53: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x2f1):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:53: undefined reference to `_gfortran_st_write_done'
lsametst.o(.text+0x335):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:51: undefined reference to `_gfortran_st_write'
lsametst.o(.text+0x347):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:51: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x359):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:51: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x361):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:51: undefined reference to `_gfortran_st_write_done'
lsametst.o(.text+0x3a5):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:49: undefined reference to `_gfortran_st_write'
lsametst.o(.text+0x3b7):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:49: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x3c9):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:49: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x3d1):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:49: undefined reference to `_gfortran_st_write_done'
lsametst.o(.text+0x415):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:47: undefined reference to `_gfortran_st_write'
lsametst.o(.text+0x427):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:47: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x439):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:47: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x441):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:47: undefined reference to `_gfortran_st_write_done'
lsametst.o(.text+0x485):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:45: undefined reference to `_gfortran_st_write'
lsametst.o(.text+0x497):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:45: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x4a9):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:45: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x4b1):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:45: undefined reference to `_gfortran_st_write_done'
lsametst.o(.text+0x4f5):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:43: undefined reference to `_gfortran_st_write'
lsametst.o(.text+0x507):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:43: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x519):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:43: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x521):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:43: undefined reference to `_gfortran_st_write_done'
lsametst.o(.text+0x565):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:41: undefined reference to `_gfortran_st_write'
lsametst.o(.text+0x577):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:41: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x589):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:41: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x591):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:41: undefined reference to `_gfortran_st_write_done'
lsametst.o(.text+0x5d5):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:39: undefined reference to `_gfortran_st_write'
lsametst.o(.text+0x5e7):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:39: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x5f9):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:39: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x601):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:39: undefined reference to `_gfortran_st_write_done'
lsametst.o(.text+0x645):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:37: undefined reference to `_gfortran_st_write'
lsametst.o(.text+0x657):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:37: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x669):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:37: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x671):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:37: undefined reference to `_gfortran_st_write_done'
lsametst.o(.text+0x6b5):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:35: undefined reference to `_gfortran_st_write'
lsametst.o(.text+0x6c7):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:35: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x6d9):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:35: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x6e1):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:35: undefined reference to `_gfortran_st_write_done'
lsametst.o(.text+0x725):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:33: undefined reference to `_gfortran_st_write'
lsametst.o(.text+0x737):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:33: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x749):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:33: undefined reference to `_gfortran_transfer_character'
lsametst.o(.text+0x751):/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL/lsametst.f:33: undefined reference to `_gfortran_st_write_done'
collect2: ld returned 1 exit status
make[1]: *** [testlsame] Error 1
make[1]: Leaving directory `/home/jjs/Desktop/tests/Mac2.1/BUILD/normal/libraries/lapack/lapack-3.1.1/INSTALL'
/bin/sh: ./testlsame: No such file or directory
/bin/sh: ./testslamch: No such file or directory
/bin/sh: ./testdlamch: No such file or directory
/bin/sh: ./testsecond: No such file or directory
/bin/sh: ./testdsecnd: No such file or directory
/bin/sh: ./testversion: No such file or directory
make: *** [lapack_install] Error 127