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Re: [Condor-users] Condor not sending to other nodes



Yes: condor_q -better

Best,


matt

On 09/14/2011 02:52 PM, AL Olson wrote:
I put those two commands at the end of the submit file so that it now
looks like this but it still only goes to the first compute node and not
the second.   Any advice?

Universe   = vanilla
Executable = /share/apps/cyana-3.0/cyana
Arguments  = autorun.cya
Log        = cyana.log
Output     = autorun.out
Error      = autorun.error

should_transfer_files = if_needed
when_to_transfer_output = on_exit

Queue 1

On Tue, Sep 6, 2011 at 8:35 AM, Matthew Farrellee <matt@xxxxxxxxxx
<mailto:matt@xxxxxxxxxx>> wrote:

    On 09/05/2011 01:47 PM, Matthew Farrellee wrote:

        On 09/05/2011 12:12 PM, AL Olson wrote:

            I have a cluster set up of 5 comps with 40 processors set up
            with ROCKS
            5.4 and im trying to use
            Condor to submit jobs to them but its only submitting them
            the first node
            (compute-0-0). Ive done some research on Condor but im not
            sure if its
            the
            way i have ROCKS configured or if im not submitting it
            properly. I have
            attached the condor submission script below. I can however
            ssh to all the
            compute nodes if that means anything.

            I would like to set my jobs so that i use processors on the
            head node as
            well as processors on other nodes set up in the cluster. If
            this has
            been discussed please point me to threads, im not sure what
            to search
            for to find those. Thanks so much.


            Universe = vanilla
            Executable = /share/apps/2.1/cyana
            Arguments = autorun.cya
            Log = cyana.log
            Output = autorun.out
            Error = autorun.error
            Queue


        Chances are high you're being bitten by FILESYSTEM_DOMAIN and
        should_transfer_files.

        http://spinningmatt.wordpress.__com/2011/07/04/getting-__started-submittinag-jobs-to-__condor/
        <http://spinningmatt.wordpress.com/2011/07/04/getting-started-submittinag-jobs-to-condor/>


    http://spinningmatt.wordpress.__com/2011/07/04/getting-__started-submitting-jobs-to-__condor/
    <http://spinningmatt.wordpress.com/2011/07/04/getting-started-submitting-jobs-to-condor/>


    ^^ submittinag isn't a word, whoops

        and,

        should_transfer_files = if_needed
        when_to_transfer_output = on_exit

        Alternatively, you can setup FILESYSTEM_DOMAIN to be the same string
        across nodes that have the same shared filesystem mounted.

        BTW, condor_q -better should indicate FileSystemDomain as a
        problem for
        the above to really be useful. 8o)

        Best,


        matt
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