[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

Re: [HTCondor-users] virtualenv, pip and htcondor (python)



Hi John, hi Brian,

Thanks for the answers. After a bit of fiddling I ended up with this set:
cmake -DPROPER:BOOL=FALSE -DCLIPPED:BOOL=TRUE -DWITH_BLAHP:BOOL=FALSE -DWITH_COREDUMPER:BOOL=FALSE \
   -DWITH_CREAM:BOOL=FALSE -DWITH_DRMAA:BOOL=FALSE -DWITH_GLOBUS:BOOL=FALSE -DWITH_GSOAP:BOOL=FALSE \
   -DWITH_HADOOP:BOOL=FALSE -DWITH_LIBVIRT:BOOL=FALSE -DWITH_LIBXML2:BOOL=FALSE -DWITH_UNICOREGAHP:BOOL=FALSE \
   -DWITH_VOMS:BOOL=FALSE -DWITH_BOINC:BOOL=FALSE -DWITH_KRB5:BOOL=FALSE -DWITH_LIBCGROUP:BOOL=OFF\
   -DWITH_GANGLIA:BOOL=OFF -DWITH_CAMPUSFACTORY:BOOL=OFF -DWITH_BOSCO:BOOL=OFF -DWANT_GLEXEC:BOOL=OFF \
   -DUW_BUILD:BOOL=TRUE -D_VERBOSE:BOOL=TRUE -DBUILDID:STRING=UW_development -DCMAKE_INSTALL_PREFIX:PATH=${PWD}/release_dir "$@"

However, since I turn off KRB5 an error occurs:
/home/vagrant/workspace/htcondor/src/condor_io/condor_auth_ssl.cpp: In static member function âstatic bool Condor_Auth_SSL::Initialize()â:
/home/vagrant/workspace/htcondor/src/condor_io/condor_auth_ssl.cpp:107:7: error: âCondor_Auth_Kerberosâ has not been declared
 if ( Condor_Auth_Kerberos::Initialize() == false ||
   Â^
src/condor_utils/CMakeFiles/condor_utils.dir/build.make:7152: recipe for target 'src/condor_utils/CMakeFiles/condor_utils.dir/__/condor_io/condor_auth_ssl.cpp.o' failed.


If I allow for KRB, the compilation fails at DAG:
[ 74%] Linking CXX executable condor_submit_dag
[ 74%] Built target condor_submit_dag
Scanning dependencies of target condor_dagman_metrics_reporter
[ 74%] Building CXX object src/condor_dagman/CMakeFiles/condor_dagman_metrics_reporter.dir/condor_dagman_metrics_reporter.cpp.o
[ 74%] Building CXX object src/condor_dagman/CMakeFiles/condor_dagman_metrics_reporter.dir/__/condor_utils/condor_version.cpp.o
[ 74%] Linking CXX executable condor_dagman_metrics_reporter
//lib/x86_64-linux-gnu/libssl.so.1.0.0: undefined reference to `SHA224_Init@xxxxxxxxxxxxx'
/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/libcurl.so: undefined reference to `ENGINE_get_id@xxxxxxxxxxxxx'
+ many more 'undefined reference'.

Is there a way to disable DAG? Essentially, I just want the python-bindings :)

And just as I said that, IÂ
cd src/python-bindings/
make

and end up with htcondor.so and classad.so!
Well, that was easy ;)


Starting from fresh, the python-bindings also compile
Â- src/classad
Â- src/condor_utils


Next step is to make the compiled libraries work with the installed ones (e.g import the module):
python -c 'import htcondor'Traceback (most recent call last):
 File "<string>", line 1, in <module>
ImportError: /home/vagrant/workspace/htcondor/src/python-bindings/libcondor_utils_8_5_9.so: undefined symbol: _ZN7classad19ClassAdJsonUnParser7UnparseERNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEPKNS_7ClassAdERKSt3setIS6_NS_12CaseIgnLTStrESaIS6_EE

BTW: 'import classad' works out-of-the-box'

For the setup.py there are two approaches:
Â1) C++ Extension:Âhttps://docs.python.org/2.7/extending/building.html
Â2) Using DistutilsInstall:Âhttp://stackoverflow.com/questions/1754966/how-can-i-run-a-makefile-in-setup-py
Not experienced with either, suggestions are welcome.


Cheers,
Luke

On 8 December 2016 at 18:21, Brian Bockelman <bbockelm@xxxxxxxxxxx> wrote:

> On Dec 8, 2016, at 7:29 AM, L Kreczko <L.Kreczko@xxxxxxxxxxxxx> wrote:
>
> Hi all,
>
> Since my work on an HTCondor task implementation for Spotify's Luigi [1], this topic is again becoming of interest.
> In order to do 'pip install htcondor', htcondor would need a setup.py that compiles the HTCondor Python bindings and distributes the libraries htcondor.so and classad.so the same way the condor-python RPM does.
>
> As I understand from the instructions [2] all I need to call in the setup.py is
> 1) match code to the installed condor version
> 2) ./configure_uw
> 3) make package
> 4) point python to the two libraries it needs to install.
>

I suspect you'll need to pick apart ./configure_uw and aggressively disable cmake flags. For example, the error you reference on 16.04 is due to a failure building a unit test. You can do without those!

> Is this a safe way? Is it possible to compile just the python bindings (I am asking because I cannot build condor on 16.04 [3])?
> Do htcondor.so and classad.so need to be compiled in the same version as the condor install or does some wiggle-room exist?
>

All variants of the compilation should result in a compatible protocol layer. However, if you disable some of the security libraries (think Globus, Kerberos), the security negotiation might fail.

Brian
_______________________________________________
HTCondor-users mailing list
To unsubscribe, send a message to htcondor-users-request@cs.wisc.edu with a
subject: Unsubscribe
You can also unsubscribe by visiting
https://lists.cs.wisc.edu/mailman/listinfo/htcondor-users

The archives can be found at:
https://lists.cs.wisc.edu/archive/htcondor-users/



--
*********************************************************
 Dr Lukasz Kreczko     ÂÂ
 Research Associate
 Department of Physics
 Particle Physics Group

 University of Bristol

 HH Wills Physics Lab
 University of Bristol
 Tyndall Avenue
 Bristol
 BS8 1TL


 +44 (0)117 928 8724Â
ÂÂ
 A top 5 UK university with leading employers (2015)
 A top 5 UK university for research (2014 REF)
 A world top 40 university (QS Ranking 2015)
*********************************************************