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Re: [HTCondor-users] setting TMPDIR to something an individual job wants
- Date: Wed, 18 May 2022 16:27:31 -0500
- From: Greg Thain <gthain@xxxxxxxxxxx>
- Subject: Re: [HTCondor-users] setting TMPDIR to something an individual job wants
On 5/18/22 15:52, Lee Damon wrote:
I have a co-worker who is trying to get some R stuff working in
condor. He needs to set TMPDIR to a much larger directory than is
usually used because... R. He's trying to set this up to hand off to a
bunch of users so having it work automagically for them is Highly
Desireable.
Right now HTcondor overrides his TMPDIR setting and as a result /var
is hitting 100% and then bad things happen.
Condor sets TMPDIR to point into the per-jop scratch directory. This
guarantees that any files written to $TMPDIR are cleaned up by condor
when the job exits. If there is a partition on the local machine with
more space than wherever the EXECUTE directory is pointing at, perhaps
that could be the new EXECUTE directory, where the scratch dirs are created?
Otherwise, the only other way to override the setting of TMPDIR would be
with a USER_JOB_WRAPPER script.
-greg