I ran condor_q -better and this came up
---
024.000: Request is being serviced
On Fri, Sep 16, 2011 at 7:05 AM, Matthew Farrellee <matt@xxxxxxxxxx
<mailto:matt@xxxxxxxxxx>> wrote:
Yes: condor_q -better
Best,
matt
On 09/14/2011 02:52 PM, AL Olson wrote:
I put those two commands at the end of the submit file so that
it now
looks like this but it still only goes to the first compute node
and not
the second. Any advice?
Universe = vanilla
Executable = /share/apps/cyana-3.0/cyana
Arguments = autorun.cya
Log = cyana.log
Output = autorun.out
Error = autorun.error
should_transfer_files = if_needed
when_to_transfer_output = on_exit
Queue 1
On Tue, Sep 6, 2011 at 8:35 AM, Matthew Farrellee
<matt@xxxxxxxxxx <mailto:matt@xxxxxxxxxx>
<mailto:matt@xxxxxxxxxx <mailto:matt@xxxxxxxxxx>>> wrote:
On 09/05/2011 01:47 PM, Matthew Farrellee wrote:
On 09/05/2011 12:12 PM, AL Olson wrote:
I have a cluster set up of 5 comps with 40
processors set up
with ROCKS
5.4 and im trying to use
Condor to submit jobs to them but its only
submitting them
the first node
(compute-0-0). Ive done some research on Condor but
im not
sure if its
the
way i have ROCKS configured or if im not submitting it
properly. I have
attached the condor submission script below. I can
however
ssh to all the
compute nodes if that means anything.
I would like to set my jobs so that i use processors
on the
head node as
well as processors on other nodes set up in the
cluster. If
this has
been discussed please point me to threads, im not
sure what
to search
for to find those. Thanks so much.
Universe = vanilla
Executable = /share/apps/2.1/cyana
Arguments = autorun.cya
Log = cyana.log
Output = autorun.out
Error = autorun.error
Queue
Chances are high you're being bitten by
FILESYSTEM_DOMAIN and
should_transfer_files.
http://spinningmatt.wordpress.____com/2011/07/04/getting-____started-submittinag-jobs-to-____condor/
<http://spinningmatt.__wordpress.com/2011/07/04/__getting-started-submittinag-__jobs-to-condor/
<http://spinningmatt.wordpress.com/2011/07/04/getting-started-submittinag-jobs-to-condor/>>
http://spinningmatt.wordpress.____com/2011/07/04/getting-____started-submitting-jobs-to-____condor/
<http://spinningmatt.__wordpress.com/2011/07/04/__getting-started-submitting-__jobs-to-condor/
<http://spinningmatt.wordpress.com/2011/07/04/getting-started-submitting-jobs-to-condor/>>
^^ submittinag isn't a word, whoops
and,
should_transfer_files = if_needed
when_to_transfer_output = on_exit
Alternatively, you can setup FILESYSTEM_DOMAIN to be the
same string
across nodes that have the same shared filesystem mounted.
BTW, condor_q -better should indicate FileSystemDomain as a
problem for
the above to really be useful. 8o)
Best,
matt
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